May
30
Bioinformatics Retreat
Come meet your colleagues working in bioinformatics and genomics! Share the vision for your science and discuss the opportunities for collaboration!
Refreshments will be provided.
REGISTRATION CLOSED: Due to filled capacity. Please reach out to cechova@fi.muni.cz to explore other options.
Retreat Agenda
08:00 - 09:00
Breakfast and registration
09:00 - 09:45
Welcome
- Iva Poulíčková: Czexpats – uniting Czech scientists with international experience
- Šárka Pospíšilová: The Genome of Europe and ACTG2 initiatives in Czechia
- Vojtěch Bystrý: OmiCZ: Czech Omics Node
- Matej Lexa: Bioinformatics at FI MU – how we got here
09:45 - 10:00
Coffee break
10:00 - 10:30
SESSION I
- David Šafránek: Bioinformatics at MU – the future
- Monika Čechová: Bioinformatics in the Telomere-To-Telomere era
- Matej Antol: FAIR research data management in Czechia
10:30 - 10:45
Coffee break
10:45 - 11:15
SESSION II
- Karel Sedlar: Introducing Bioinformatics and Systems Biology Lab (BioSys_BUT)
- Robert Vacha: Design of Peptide Therapeutics
- Marie Krátká: The effect of centromere architecture on LTR retrotransposon dynamics
11:15 - 11:30
Coffee break
11:30 - 12:10
SESSION III
- Darina Čejková: Agricultural Microbiomes and their Analysis
- Samuel Pastva: Unraveling dynamics of gene regulation with logic-based modeling
- Kseniya Bobryshava: A comparative analysis of ASV and OTU approaches in the evaluation of bacterial communities in mine dumps
- Jaroslav Olha: Reproducible scRNA-seq workflows
12:10 - 13:00
Lunch break
13:00 - 14:00
Parallel sessions
- Session 1: Poster presentations
- Session 2: usegalaxy.cz booth "Galaxy can run your workflows for you – change my mind."
14:00 - 15:00
AI workshop
15:00 - 15:05
Final remarks